Health Sciences Library System Workshop

RNA-Seq Analysis: CLC Genomics Workbench



Date
December 6, 2017
Time
1:00 PM - 4:00 PM
Speaker(s)
Ansuman Chattopadhyay
Assistant Director for Molecular Biology Information Services
Location
Scaife Hall, Falk Library, Classroom 2
Category
University of Pittsburgh – Health Sciences Library System
Contact
Carrie Iwema



412-383-6887
iwema@pitt.edu
Admission
Registration required
Description

This hands-on workshop will provide an introduction to RNA-Seq analysis using the library-licensed CLC Genomics Workbench. Participants will learn how to (1) import reads from an NCBI GEO dataset (GSE52778), (2) align RNA-Seq data to a reference genome, (3) calculate known genes and transcript expressions, (4) perform differential expression analysis, and (5) discover novel exons.

Please register for CLC Genomics Workbench, Biomedical Genomics Workbench and Correlation Engine.

You must also sign up for a Center for Research Computing HPC allocation.

Click here to register for this workshop.