Health Sciences Library System Workshop

Variant Detection & Analysis: CLC Genomics & IVA



Date
February 7, 2018
Time
1:00 PM - 4:00 PM
Speaker(s)
Ansuman Chattopadhyay
Assistant Director for Molecular Biology Information Services
Location
Scaife Hall, Falk Library, Classroom 2
Category
University of Pittsburgh – Health Sciences Library System
Description

This hands-on workshop focuses on human genetic variations and cancer mutations. It covers identification of variants using CLC Genomics Workbench software and introduces variation databases (dbSNP, ClinVar, OMIM, DGV, PheGenI, HGMD, Correlation Engine, COSMIC, Broad Tumor Portal, gnomAD Browser, RegulomeDb). The workshop teaches how to use bioinformatics tools for functional analysis of mutations and covers web tools such as EBI Variant Effect Predictor, Ingenuity Variant Analysis (IVA), and PredictSNP2.

Website: http://hsls.libguides.com/variations

Please also register for:

You must also sign up for a Center for Research Computing HPC allocation.

Register for workshop here.