Health Sciences Library System Workshop

RNA-Seq & CLC Genomics



Date
March 13, 2019
Time
1:00 PM - 4:00 PM
Speaker(s)
Ansuman Chattopadhyay
Assistant Director for Molecular Biology Information Services
Location
Scaife Hall, Falk Library, Classroom 2
Category
University of Pittsburgh - Health Sciences Library System
Contact
Ansuman Chattopadhyay



412-648-8866
ansuman@pitt.edu
Description

This hands-on workshop is an introduction to RNA-Seq analysis using the library-licensed CLC Genomics Workbench. Learn how to (1) import reads from an NCBI GEO dataset (GSE52778), (2) align RNA-Seq data to a reference genome, (3) calculate known genes and transcript expressions, and (4) perform differential expression analysis.

Workshop Guide:  https://hsls.libguides.com/MolBioWorkshops/RNAseqCLC

Please register for: CLC Genomics Workbench

You must also sign up for a Center for Research Computing HPC allocation, and mention your intention to attend the HSLS-offered CLC Genomics Workbench workshop on RNA-Seq.

Register for this class.