Health Sciences Library System Workshop

Chromatin Profile (ChIP-Seq/ATAC-Seq) Analysis: CLC Genomics Workbench



Date
November 15, 2017
Time
1:00 PM - 4:00 PM
Speaker(s)
Ansuman Chattopadhyay
Assistant Director for Molecular Biology Information Services
Location
Scaife Hall, Falk Library, Classroom 2
Category
University of Pittsburgh – Health Sciences Library System
Contact
Carrie Iwema



412-383-6887
iwema@pitt.edu
Admission
Registration required
Description

This hands-on workshop will provide an introduction to chromatin profile (ATAC-seq/ChIP-seq) analysis using the library-licensed CLC Genomics Workbench. Participants will learn how to (1) import NGS reads from an NCBI GEO dataset (GSE95339), (2) map the reads to a reference genome, (3) call peaks, and (4) visualize the results.

Please register for CLC Genomics Workbench.

You must also sign up for a Center for Research Computing HPC allocation.

Click here to register for this workshop.