Health Sciences Library System Workshop

RNA-Seq & CLC Genomics



Date
March 28, 2018
Time
1:00 PM - 4:00 PM
Speaker(s)
Ansuman Chattopadhyay
Assistant Director for Molecular Biology Information Services
Location
Scaife Hall, Falk Library, Classroom 2
Category
University of Pittsburgh – Health Sciences Library System
Contact
Ansuman Chattopadhyay



412-648-1297
ansuman@pitt.edu
Description

This hands-on workshop is an introduction to RNA-Seq analysis using the library-licensed CLC Genomics Workbench. Learn how to (1) import reads from an NCBI GEO dataset (GSE52778), (2) align RNA-Seq data to a reference genome, (3) calculate known genes and transcript expressions, and (4) perform differential expression analysis.

Website: http://hsls.libguides.com/rnaseq

Please also register for:

You must sign up for a Center for Research Computing HPC allocation.

Register for workshop here.